Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 MIR1199-201ENST00000621445 119 ntBASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM4Q8WVI0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 PCED1CP-201ENST00000419887 785 ntBASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 AC092474.2-201ENST00000424288 719 ntBASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 AC108073.2-201ENST00000464002 357 ntBASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 AC024267.1-201ENST00000582320 895 ntBASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 IER3-202ENST00000376377 1350 ntBASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM4Q8WVI0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms