Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCD2Q8WV60 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCD2Q8WV60 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 SPTLC1P1-201ENST00000447199 261 ntBASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 SERBP1P3-201ENST00000459980 809 ntBASIC15.84■□□□□ 0.13
PTCD2Q8WV60 RN7SL618P-201ENST00000477850 296 ntBASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 MIR6069-201ENST00000620069 79 ntBASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AL033527.5-202ENST00000641632 1098 ntBASIC15.84■□□□□ 0.13
PTCD2Q8WV60 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCD2Q8WV60 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 AC099063.4-201ENST00000641099 1602 ntBASIC15.83■□□□□ 0.13
PTCD2Q8WV60 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.83■□□□□ 0.13
PTCD2Q8WV60 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 FAM207CP-201ENST00000443486 507 ntBASIC15.83■□□□□ 0.12
PTCD2Q8WV60 GNAQP1-201ENST00000444815 1067 ntBASIC15.83■□□□□ 0.12
PTCD2Q8WV60 COX20P2-201ENST00000452636 358 ntBASIC15.83■□□□□ 0.12
PTCD2Q8WV60 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 TERF1P3-201ENST00000505638 1227 ntBASIC15.83■□□□□ 0.12
PTCD2Q8WV60 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 RPAP2P1-201ENST00000603626 1168 ntBASIC15.83■□□□□ 0.12
PTCD2Q8WV60 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PTCD2Q8WV60 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms