Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 RN7SL399P-201ENST00000471648 279 ntBASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 AC104596.2-201ENST00000512793 793 ntBASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 AL391069.4-201ENST00000609583 481 ntBASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 MIR8072-201ENST00000614241 80 ntBASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 CLK3P2-201ENST00000427566 1453 ntBASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 AP006294.1-201ENST00000415407 339 ntBASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 ELK1P1-201ENST00000485699 580 ntBASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FNDC9Q8TBE3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 AC098614.1-201ENST00000368528 745 ntBASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 COX5BP8-201ENST00000416911 349 ntBASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 NME2P1-201ENST00000426182 414 ntBASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 GAPDHP21-201ENST00000450301 1010 ntBASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms