Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AC015910.1-201ENST00000579400 975 ntBASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 MIR4525-201ENST00000580000 75 ntBASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AC244669.2-201ENST00000612320 853 ntBASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 AL133267.1-201ENST00000398220 340 ntBASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 MIR1908-201ENST00000410394 80 ntBASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ACTBP11-201ENST00000436287 1126 ntBASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 MIR4313-201ENST00000580760 101 ntBASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHKBP1Q8TBC3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 AC016694.1-201ENST00000434179 700 ntBASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 RNA5SP412-201ENST00000516234 123 ntBASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms