Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 MRPS18AP1-201ENST00000414458 589 ntBASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 TIMM17BP1-201ENST00000545713 516 ntBASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 AC000095.1-201ENST00000603208 874 ntBASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 AL391069.4-201ENST00000609583 481 ntBASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 AC004790.1-201ENST00000612686 536 ntBASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH19Q8TAB3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 GHSR-202ENST00000427970 912 ntBASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 AC135586.1-201ENST00000539323 574 ntBASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 SRD5A3P1-201ENST00000603021 949 ntBASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 AL158212.4-201ENST00000624062 1286 ntBASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms