Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 AC112482.1-201ENST00000492080 688 ntBASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 MIR6080-201ENST00000617359 66 ntBASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 AC099063.4-201ENST00000641099 1602 ntBASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLHC1Q8NHS4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 MIR4453-201ENST00000584019 89 ntBASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AC004835.2-201ENST00000603762 682 ntBASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 RN7SL828P-201ENST00000607615 303 ntBASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AL133215.2-201ENST00000609242 977 ntBASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLHC1Q8NHS4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms