Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AL139400.1-201ENST00000366220 510 ntBASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MIR1233-2-201ENST00000408138 82 ntBASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MIR1233-1-201ENST00000408722 82 ntBASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AL080243.2-201ENST00000418783 582 ntBASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF439Q8NDP4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 AC112693.3-201ENST00000624819 1983 ntBASIC12.93□□□□□ -0.34
ZNF439Q8NDP4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms