Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC008741.2-201ENST00000612792 3115 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AL596087.1-201ENST00000400979 1969 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 AP003680.1-201ENST00000598970 3660 ntBASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 CD8B2-202ENST00000417670 633 ntBASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.37■□□□□ 0.05
TMEFF1Q8IYR6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 ACTBP8-201ENST00000403258 1108 ntBASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 BX284668.4-201ENST00000453917 508 ntBASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 MIR4313-201ENST00000580760 101 ntBASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 AC018735.1-201ENST00000437208 1502 ntBASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEFF1Q8IYR6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms