Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 AC004790.1-201ENST00000612686 536 ntBASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 TNRC18P2-201ENST00000417666 2714 ntBASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC105Q8IYK2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC105Q8IYK2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC105Q8IYK2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
CCDC105Q8IYK2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC105Q8IYK2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CCDC105Q8IYK2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.83■□□□□ 0.29
CCDC105Q8IYK2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 AC093724.1-201ENST00000448659 1027 ntBASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 AC133552.6-201ENST00000613406 534 ntBASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC105Q8IYK2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 TMBIM7P-203ENST00000641617 1718 ntBASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 AL079307.3-201ENST00000556114 283 ntBASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 AC105021.1-202ENST00000570572 669 ntBASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 AL133215.2-201ENST00000609242 977 ntBASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 AC068587.10-201ENST00000641210 219 ntBASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 PCDHA3-202ENST00000532566 4594 ntBASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC105Q8IYK2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms