Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FAM207CP-201ENST00000443486 507 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 GAPDHP40-201ENST00000505218 1006 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 AC055876.2-201ENST00000531834 546 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 LINC02560-201ENST00000596379 459 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 AL662799.1-202ENST00000614205 422 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 SLC7A15P-201ENST00000424028 1363 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 AC068418.2-201ENST00000577309 3703 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 HMGN1P19-201ENST00000436976 333 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 AC002472.2-201ENST00000442739 958 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 AGAP7P-201ENST00000582299 2062 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 AL132655.2-201ENST00000596276 594 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 MIR8072-201ENST00000614241 80 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 AGAP14-201ENST00000624701 2060 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 AC008761.3-201ENST00000624803 892 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 AL645728.2-202ENST00000641679 227 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN20Q4JDL3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AC006058.4-201ENST00000624016 1670 ntBASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AC103702.1-201ENST00000548801 2630 ntBASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AC104457.1-201ENST00000401024 814 ntBASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 MEP1AP4-201ENST00000423244 1087 ntBASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms