Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.63■□□□□ 0.57
RFX7Q2KHR2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AC093433.1-201ENST00000458048 571 ntBASIC18.63■□□□□ 0.57
RFX7Q2KHR2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AL583810.1-201ENST00000553344 1045 ntBASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AC244669.2-201ENST00000612320 853 ntBASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 CICP11-201ENST00000434745 2827 ntBASIC18.63■□□□□ 0.57
RFX7Q2KHR2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX7Q2KHR2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 AC006058.4-201ENST00000624016 1670 ntBASIC18.62■□□□□ 0.57
RFX7Q2KHR2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 AL355864.2-201ENST00000447420 863 ntBASIC18.62■□□□□ 0.57
RFX7Q2KHR2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 AC093813.1-201ENST00000605066 256 ntBASIC18.62■□□□□ 0.57
RFX7Q2KHR2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX7Q2KHR2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 AC012508.2-201ENST00000567613 1472 ntBASIC18.61■□□□□ 0.57
RFX7Q2KHR2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 MIR1908-201ENST00000410394 80 ntBASIC18.61■□□□□ 0.57
RFX7Q2KHR2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 AC004066.1-201ENST00000502488 802 ntBASIC18.61■□□□□ 0.57
RFX7Q2KHR2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 MIR4525-201ENST00000580000 75 ntBASIC18.61■□□□□ 0.57
RFX7Q2KHR2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms