Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.57□□□□□ -0.56
CMC4P56277 BRI3BPP1-201ENST00000594224 787 ntBASIC11.57□□□□□ -0.56
CMC4P56277 AL049840.4-201ENST00000602422 811 ntBASIC11.57□□□□□ -0.56
CMC4P56277 AL391069.4-201ENST00000609583 481 ntBASIC11.57□□□□□ -0.56
CMC4P56277 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.57□□□□□ -0.56
CMC4P56277 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CMC4P56277 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CMC4P56277 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
CMC4P56277 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CMC4P56277 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.56□□□□□ -0.56
CMC4P56277 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.56□□□□□ -0.56
CMC4P56277 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.56□□□□□ -0.56
CMC4P56277 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.56□□□□□ -0.56
CMC4P56277 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 SPDYE22P-201ENST00000582158 798 ntBASIC11.56□□□□□ -0.56
CMC4P56277 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.56□□□□□ -0.56
CMC4P56277 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 AC025181.2-201ENST00000606994 802 ntBASIC11.56□□□□□ -0.56
CMC4P56277 AC007431.3-201ENST00000623221 587 ntBASIC11.56□□□□□ -0.56
CMC4P56277 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CMC4P56277 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 AC105250.1-201ENST00000509378 2057 ntBASIC11.56□□□□□ -0.56
CMC4P56277 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.56□□□□□ -0.56
CMC4P56277 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CMC4P56277 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CMC4P56277 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms