Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.99■□□□□ 0.15
ATXN3P54252 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 AC015936.2-201ENST00000593177 259 ntBASIC15.99■□□□□ 0.15
ATXN3P54252 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 KRT8P39-201ENST00000396270 1433 ntBASIC15.98■□□□□ 0.15
ATXN3P54252 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 AC104989.1-201ENST00000519711 778 ntBASIC15.98■□□□□ 0.15
ATXN3P54252 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ATXN3P54252 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 RN7SL219P-201ENST00000582872 296 ntBASIC15.98■□□□□ 0.15
ATXN3P54252 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ATXN3P54252 AL033527.5-201ENST00000641382 801 ntBASIC15.98■□□□□ 0.15
ATXN3P54252 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.98■□□□□ 0.15
ATXN3P54252 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATXN3P54252 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ATXN3P54252 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
ATXN3P54252 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATXN3P54252 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ATXN3P54252 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.97■□□□□ 0.15
ATXN3P54252 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
ATXN3P54252 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATXN3P54252 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.97■□□□□ 0.15
ATXN3P54252 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.97■□□□□ 0.15
ATXN3P54252 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATXN3P54252 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
ATXN3P54252 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms