Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.92■□□□□ 0.62
NUP98P52948 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
NUP98P52948 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.92■□□□□ 0.62
NUP98P52948 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.92■□□□□ 0.62
NUP98P52948 AL137783.1-201ENST00000623494 1896 ntBASIC18.92■□□□□ 0.62
NUP98P52948 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
NUP98P52948 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.92■□□□□ 0.62
NUP98P52948 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 AC244394.1-201ENST00000435000 1665 ntBASIC18.92■□□□□ 0.62
NUP98P52948 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.92■□□□□ 0.62
NUP98P52948 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NUP98P52948 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NUP98P52948 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.91■□□□□ 0.62
NUP98P52948 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NUP98P52948 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.91■□□□□ 0.62
NUP98P52948 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.91■□□□□ 0.62
NUP98P52948 ALG3P1-201ENST00000508806 1114 ntBASIC18.91■□□□□ 0.62
NUP98P52948 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.91■□□□□ 0.62
NUP98P52948 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.91■□□□□ 0.62
NUP98P52948 AC103988.2-201ENST00000561804 725 ntBASIC18.91■□□□□ 0.62
NUP98P52948 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.91■□□□□ 0.62
NUP98P52948 AL136301.1-201ENST00000615830 422 ntBASIC18.91■□□□□ 0.62
NUP98P52948 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.91■□□□□ 0.62
NUP98P52948 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NUP98P52948 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
NUP98P52948 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 AC020910.5-201ENST00000623668 1865 ntBASIC18.91■□□□□ 0.62
NUP98P52948 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUP98P52948 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NUP98P52948 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.9■□□□□ 0.62
NUP98P52948 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.9■□□□□ 0.62
NUP98P52948 AC125604.1-201ENST00000496255 707 ntBASIC18.9■□□□□ 0.62
NUP98P52948 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 AC116345.2-201ENST00000512837 523 ntBASIC18.9■□□□□ 0.62
NUP98P52948 AC005962.1-201ENST00000584100 773 ntBASIC18.9■□□□□ 0.62
NUP98P52948 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.9■□□□□ 0.62
NUP98P52948 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 KRT18P36-201ENST00000411618 1276 ntBASIC18.9■□□□□ 0.62
NUP98P52948 RN7SL769P-201ENST00000469386 295 ntBASIC18.9■□□□□ 0.62
NUP98P52948 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.9■□□□□ 0.62
NUP98P52948 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.9■□□□□ 0.62
NUP98P52948 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.9■□□□□ 0.62
NUP98P52948 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.9■□□□□ 0.62
NUP98P52948 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 PCDHA1-201ENST00000378133 2726 ntBASIC18.9■□□□□ 0.62
NUP98P52948 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.9■□□□□ 0.62
NUP98P52948 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
NUP98P52948 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NUP98P52948 AC003102.2-201ENST00000589195 1469 ntBASIC18.9■□□□□ 0.62
NUP98P52948 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUP98P52948 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.89■□□□□ 0.62
NUP98P52948 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NUP98P52948 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NUP98P52948 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.89■□□□□ 0.61
NUP98P52948 AC023090.2-201ENST00000625182 2110 ntBASIC18.89■□□□□ 0.61
NUP98P52948 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
NUP98P52948 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NUP98P52948 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.89■□□□□ 0.61
NUP98P52948 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.89■□□□□ 0.61
NUP98P52948 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.89■□□□□ 0.61
NUP98P52948 RPS2P36-201ENST00000456516 831 ntBASIC18.89■□□□□ 0.61
NUP98P52948 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.89■□□□□ 0.61
NUP98P52948 AC134698.3-201ENST00000523880 214 ntBASIC18.89■□□□□ 0.61
NUP98P52948 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms