Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLCN3P51790 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.98■□□□□ 0.31
CLCN3P51790 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLCN3P51790 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.98■□□□□ 0.31
CLCN3P51790 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLCN3P51790 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLCN3P51790 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 CNN2P8-201ENST00000421872 913 ntBASIC16.98■□□□□ 0.31
CLCN3P51790 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCN3P51790 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 AC004066.1-201ENST00000502488 802 ntBASIC16.98■□□□□ 0.31
CLCN3P51790 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.98■□□□□ 0.31
CLCN3P51790 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 AL158070.2-201ENST00000623713 1621 ntBASIC16.98■□□□□ 0.31
CLCN3P51790 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.98■□□□□ 0.31
CLCN3P51790 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCN3P51790 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCN3P51790 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLCN3P51790 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CLCN3P51790 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CLCN3P51790 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN3P51790 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.97■□□□□ 0.31
CLCN3P51790 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CLCN3P51790 AC008741.2-201ENST00000612792 3115 ntBASIC16.97■□□□□ 0.31
CLCN3P51790 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.97■□□□□ 0.31
CLCN3P51790 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 ACTBP8-201ENST00000403258 1108 ntBASIC16.97■□□□□ 0.31
CLCN3P51790 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.97■□□□□ 0.31
CLCN3P51790 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.97■□□□□ 0.31
CLCN3P51790 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.97■□□□□ 0.31
CLCN3P51790 AC078819.1-201ENST00000547454 765 ntBASIC16.97■□□□□ 0.31
CLCN3P51790 AC012085.1-201ENST00000548270 765 ntBASIC16.97■□□□□ 0.31
CLCN3P51790 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.97■□□□□ 0.31
CLCN3P51790 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.97■□□□□ 0.31
CLCN3P51790 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.97■□□□□ 0.31
CLCN3P51790 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CLCN3P51790 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLCN3P51790 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN3P51790 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLCN3P51790 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN3P51790 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CLCN3P51790 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN3P51790 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms