Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CSNK1DP48730 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CSNK1DP48730 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 AC005229.1-201ENST00000392885 409 ntBASIC15.5■□□□□ 0.07
CSNK1DP48730 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.5■□□□□ 0.07
CSNK1DP48730 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.5■□□□□ 0.07
CSNK1DP48730 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.5■□□□□ 0.07
CSNK1DP48730 KRT18P25-201ENST00000508931 1278 ntBASIC15.5■□□□□ 0.07
CSNK1DP48730 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CSNK1DP48730 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 SLC25A47P1-201ENST00000531577 414 ntBASIC15.5■□□□□ 0.07
CSNK1DP48730 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.5■□□□□ 0.07
CSNK1DP48730 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.5■□□□□ 0.07
CSNK1DP48730 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CSNK1DP48730 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 BTNL10-201ENST00000595971 695 ntBASIC15.5■□□□□ 0.07
CSNK1DP48730 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CSNK1DP48730 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1DP48730 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CSNK1DP48730 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1DP48730 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1DP48730 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 PPT1-215ENST00000641471 2368 ntBASIC15.49■□□□□ 0.07
CSNK1DP48730 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 AC011270.2-201ENST00000624293 2550 ntBASIC15.49■□□□□ 0.07
CSNK1DP48730 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 AC134312.5-201ENST00000568031 1313 ntBASIC15.49■□□□□ 0.07
CSNK1DP48730 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 ACTBP8-201ENST00000403258 1108 ntBASIC15.49■□□□□ 0.07
CSNK1DP48730 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1DP48730 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1DP48730 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 AC233724.13-201ENST00000598383 410 ntBASIC15.49■□□□□ 0.07
CSNK1DP48730 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1DP48730 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.49■□□□□ 0.07
CSNK1DP48730 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1DP48730 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1DP48730 AL603764.1-201ENST00000636452 321 ntBASIC15.49■□□□□ 0.07
CSNK1DP48730 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1DP48730 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CSNK1DP48730 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1DP48730 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms