Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A2P43354 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A2P43354 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A2P43354 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A2P43354 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.25□□□□□ -0.13
NR4A2P43354 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A2P43354 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A2P43354 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.25□□□□□ -0.13
NR4A2P43354 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NR4A2P43354 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A2P43354 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 AC005562.1-201ENST00000583030 3219 ntBASIC14.24□□□□□ -0.13
NR4A2P43354 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR4A2P43354 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 AC027612.1-201ENST00000445234 2395 ntBASIC14.24□□□□□ -0.13
NR4A2P43354 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR4A2P43354 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 AC140658.5-201ENST00000438532 169 ntBASIC14.24□□□□□ -0.13
NR4A2P43354 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 AC023141.5-201ENST00000458585 616 ntBASIC14.24□□□□□ -0.13
NR4A2P43354 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.24□□□□□ -0.13
NR4A2P43354 HLA-J-203ENST00000494367 1087 ntBASIC14.24□□□□□ -0.13
NR4A2P43354 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.24□□□□□ -0.13
NR4A2P43354 AC011467.4-201ENST00000594891 528 ntBASIC14.24□□□□□ -0.13
NR4A2P43354 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NR4A2P43354 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A2P43354 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A2P43354 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR4A2P43354 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NR4A2P43354 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.23□□□□□ -0.13
NR4A2P43354 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NR4A2P43354 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A2P43354 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 TIMM8BP1-201ENST00000452384 211 ntBASIC14.23□□□□□ -0.13
NR4A2P43354 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A2P43354 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A2P43354 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NR4A2P43354 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
NR4A2P43354 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.23□□□□□ -0.13
NR4A2P43354 AC107918.2-201ENST00000530817 355 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms