Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HADHAP40939 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 AC100757.3-201ENST00000622361 1406 ntBASIC15.78■□□□□ 0.12
HADHAP40939 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.78■□□□□ 0.12
HADHAP40939 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.78■□□□□ 0.12
HADHAP40939 AC241585.1-201ENST00000433527 519 ntBASIC15.78■□□□□ 0.12
HADHAP40939 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.78■□□□□ 0.12
HADHAP40939 ZNF890P-202ENST00000530367 1156 ntBASIC15.78■□□□□ 0.12
HADHAP40939 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.78■□□□□ 0.12
HADHAP40939 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HADHAP40939 AL512361.1-201ENST00000554200 418 ntBASIC15.78■□□□□ 0.12
HADHAP40939 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 AC010336.2-201ENST00000564226 506 ntBASIC15.78■□□□□ 0.12
HADHAP40939 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.78■□□□□ 0.12
HADHAP40939 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.78■□□□□ 0.12
HADHAP40939 AC025048.3-201ENST00000590609 569 ntBASIC15.78■□□□□ 0.12
HADHAP40939 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 AC106028.4-201ENST00000614509 607 ntBASIC15.78■□□□□ 0.12
HADHAP40939 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 AC005702.4-201ENST00000618393 416 ntBASIC15.78■□□□□ 0.12
HADHAP40939 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HADHAP40939 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.78■□□□□ 0.12
HADHAP40939 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HADHAP40939 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.78■□□□□ 0.12
HADHAP40939 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 AC097376.2-205ENST00000610159 5334 ntBASIC15.78■□□□□ 0.12
HADHAP40939 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HADHAP40939 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.77■□□□□ 0.12
HADHAP40939 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.77■□□□□ 0.12
HADHAP40939 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.77■□□□□ 0.12
HADHAP40939 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HADHAP40939 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.77■□□□□ 0.12
HADHAP40939 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.77■□□□□ 0.12
HADHAP40939 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.77■□□□□ 0.12
HADHAP40939 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 MIR770-201ENST00000390219 98 ntBASIC15.77■□□□□ 0.12
HADHAP40939 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.77■□□□□ 0.12
HADHAP40939 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.77■□□□□ 0.12
HADHAP40939 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.77■□□□□ 0.12
HADHAP40939 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.77■□□□□ 0.12
HADHAP40939 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.77■□□□□ 0.12
HADHAP40939 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
HADHAP40939 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.77■□□□□ 0.12
HADHAP40939 SDHAP3-202ENST00000515467 728 ntBASIC15.77■□□□□ 0.12
HADHAP40939 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.77■□□□□ 0.12
HADHAP40939 DUX4L27-201ENST00000554796 1261 ntBASIC15.77■□□□□ 0.12
HADHAP40939 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.77■□□□□ 0.12
HADHAP40939 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HADHAP40939 AC074044.1-201ENST00000609673 707 ntBASIC15.77■□□□□ 0.12
HADHAP40939 AL590560.3-201ENST00000623350 461 ntBASIC15.77■□□□□ 0.12
HADHAP40939 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.77■□□□□ 0.11
HADHAP40939 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HADHAP40939 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HADHAP40939 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HADHAP40939 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HADHAP40939 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HADHAP40939 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HADHAP40939 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HADHAP40939 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HADHAP40939 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HADHAP40939 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
HADHAP40939 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.77■□□□□ 0.11
HADHAP40939 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.11
HADHAP40939 AP002414.2-201ENST00000591780 3365 ntBASIC15.76■□□□□ 0.11
HADHAP40939 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.76■□□□□ 0.11
HADHAP40939 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms