Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.71■□□□□ 0.43
COPB2P35606 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.71■□□□□ 0.43
COPB2P35606 PRSS30P-206ENST00000641773 873 ntBASIC17.71■□□□□ 0.43
COPB2P35606 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COPB2P35606 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.71■□□□□ 0.43
COPB2P35606 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.71■□□□□ 0.42
COPB2P35606 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COPB2P35606 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
COPB2P35606 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.71■□□□□ 0.42
COPB2P35606 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COPB2P35606 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.7■□□□□ 0.42
COPB2P35606 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.7■□□□□ 0.42
COPB2P35606 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.7■□□□□ 0.42
COPB2P35606 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.7■□□□□ 0.42
COPB2P35606 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.7■□□□□ 0.42
COPB2P35606 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 AC243960.2-201ENST00000600996 747 ntBASIC17.7■□□□□ 0.42
COPB2P35606 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.7■□□□□ 0.42
COPB2P35606 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.7■□□□□ 0.42
COPB2P35606 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COPB2P35606 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.7■□□□□ 0.42
COPB2P35606 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPB2P35606 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COPB2P35606 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COPB2P35606 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 RNU1-114P-201ENST00000365297 166 ntBASIC17.69■□□□□ 0.42
COPB2P35606 MIR1247-201ENST00000408206 136 ntBASIC17.69■□□□□ 0.42
COPB2P35606 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.69■□□□□ 0.42
COPB2P35606 AC006033.1-201ENST00000440505 426 ntBASIC17.69■□□□□ 0.42
COPB2P35606 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.69■□□□□ 0.42
COPB2P35606 AC099548.2-209ENST00000480264 625 ntBASIC17.69■□□□□ 0.42
COPB2P35606 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.69■□□□□ 0.42
COPB2P35606 AC004066.1-201ENST00000502488 802 ntBASIC17.69■□□□□ 0.42
COPB2P35606 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
COPB2P35606 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COPB2P35606 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.69■□□□□ 0.42
COPB2P35606 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms