Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
THBS4P35443 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
THBS4P35443 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THBS4P35443 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
THBS4P35443 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.73□□□□□ -0.21
THBS4P35443 PCDHA3-202ENST00000532566 4594 ntBASIC13.73□□□□□ -0.21
THBS4P35443 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 AC127383.1-201ENST00000444697 1800 ntBASIC13.72□□□□□ -0.21
THBS4P35443 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
THBS4P35443 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.72□□□□□ -0.21
THBS4P35443 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.72□□□□□ -0.21
THBS4P35443 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.72□□□□□ -0.21
THBS4P35443 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
THBS4P35443 EEF1DP4-201ENST00000446006 880 ntBASIC13.72□□□□□ -0.21
THBS4P35443 SPTLC1P1-201ENST00000447199 261 ntBASIC13.72□□□□□ -0.21
THBS4P35443 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.72□□□□□ -0.21
THBS4P35443 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.72□□□□□ -0.21
THBS4P35443 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 AC104794.3-201ENST00000566840 1248 ntBASIC13.72□□□□□ -0.21
THBS4P35443 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 AC112693.3-201ENST00000624819 1983 ntBASIC13.72□□□□□ -0.21
THBS4P35443 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THBS4P35443 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
THBS4P35443 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.72□□□□□ -0.21
THBS4P35443 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
THBS4P35443 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS4P35443 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS4P35443 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
THBS4P35443 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
THBS4P35443 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 AC114501.2-201ENST00000439631 535 ntBASIC13.71□□□□□ -0.21
THBS4P35443 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS4P35443 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS4P35443 COX20P2-201ENST00000452636 358 ntBASIC13.71□□□□□ -0.21
THBS4P35443 PHKG1P2-201ENST00000457537 863 ntBASIC13.71□□□□□ -0.21
THBS4P35443 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS4P35443 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS4P35443 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.71□□□□□ -0.21
THBS4P35443 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
THBS4P35443 AC025048.3-201ENST00000590609 569 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms