Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL1P22362 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL1P22362 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 SDHAP3-202ENST00000515467 728 ntBASIC13.37□□□□□ -0.27
CCL1P22362 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 ZNF890P-202ENST00000530367 1156 ntBASIC13.37□□□□□ -0.27
CCL1P22362 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 AC015911.4-201ENST00000588022 1070 ntBASIC13.37□□□□□ -0.27
CCL1P22362 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL1P22362 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCL1P22362 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCL1P22362 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CCL1P22362 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CCL1P22362 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL1P22362 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL1P22362 CNN2P2-201ENST00000443536 909 ntBASIC13.36□□□□□ -0.27
CCL1P22362 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL1P22362 CNN2P3-201ENST00000450201 906 ntBASIC13.36□□□□□ -0.27
CCL1P22362 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL1P22362 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL1P22362 AC109322.1-201ENST00000524499 1264 ntBASIC13.36□□□□□ -0.27
CCL1P22362 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.36□□□□□ -0.27
CCL1P22362 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL1P22362 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
CCL1P22362 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 AL136317.3-201ENST00000618497 906 ntBASIC13.36□□□□□ -0.27
CCL1P22362 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 AC073592.8-201ENST00000624126 511 ntBASIC13.36□□□□□ -0.27
CCL1P22362 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL1P22362 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL1P22362 AC134684.3-201ENST00000641758 218 ntBASIC13.36□□□□□ -0.27
CCL1P22362 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL1P22362 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL1P22362 AC005089.1-201ENST00000619486 2241 ntBASIC13.36□□□□□ -0.27
CCL1P22362 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL1P22362 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL1P22362 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CCL1P22362 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCL1P22362 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL1P22362 AC004967.1-201ENST00000453589 447 ntBASIC13.35□□□□□ -0.27
CCL1P22362 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL1P22362 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL1P22362 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL1P22362 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL1P22362 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CCL1P22362 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCL1P22362 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL1P22362 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms