Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MTHFR-217ENST00000641820 1569 ntBASIC18.03■□□□□ 0.48
ERCC3P19447 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC3P19447 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.03■□□□□ 0.48
ERCC3P19447 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC3P19447 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC3P19447 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC3P19447 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC3P19447 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC3P19447 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC3P19447 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC3P19447 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ERCC3P19447 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC3P19447 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC3P19447 FAM21FP-201ENST00000426241 1131 ntBASIC18.02■□□□□ 0.48
ERCC3P19447 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.02■□□□□ 0.48
ERCC3P19447 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC3P19447 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ERCC3P19447 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ERCC3P19447 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.02■□□□□ 0.48
ERCC3P19447 AL606495.2-201ENST00000605867 535 ntBASIC18.02■□□□□ 0.48
ERCC3P19447 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 AC018892.3-201ENST00000623986 2499 ntBASIC18.02■□□□□ 0.48
ERCC3P19447 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.02■□□□□ 0.48
ERCC3P19447 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.02■□□□□ 0.47
ERCC3P19447 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.02■□□□□ 0.47
ERCC3P19447 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
ERCC3P19447 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.02■□□□□ 0.47
ERCC3P19447 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
ERCC3P19447 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC3P19447 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
ERCC3P19447 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
ERCC3P19447 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ERCC3P19447 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 BRWD1P1-201ENST00000401091 371 ntBASIC18.01■□□□□ 0.47
ERCC3P19447 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC3P19447 KRT18P43-201ENST00000469825 1281 ntBASIC18.01■□□□□ 0.47
ERCC3P19447 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.01■□□□□ 0.47
ERCC3P19447 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC3P19447 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 AC244669.2-201ENST00000612320 853 ntBASIC18.01■□□□□ 0.47
ERCC3P19447 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ERCC3P19447 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC3P19447 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ERCC3P19447 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ERCC3P19447 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC3P19447 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC3P19447 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ERCC3P19447 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC3P19447 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC3P19447 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.01■□□□□ 0.47
ERCC3P19447 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC3P19447 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
ERCC3P19447 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC3P19447 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC3P19447 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18■□□□□ 0.47
ERCC3P19447 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18■□□□□ 0.47
ERCC3P19447 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC3P19447 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms