Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTLA4P16410 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTLA4P16410 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTLA4P16410 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTLA4P16410 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.82□□□□□ -0.2
CTLA4P16410 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.82□□□□□ -0.2
CTLA4P16410 AC107890.1-201ENST00000422478 521 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.82□□□□□ -0.2
CTLA4P16410 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.82□□□□□ -0.2
CTLA4P16410 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 AC140878.1-201ENST00000565277 250 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 AP001160.2-201ENST00000596071 487 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 AC074044.1-201ENST00000609673 707 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTLA4P16410 AC093028.1-201ENST00000622998 982 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 AL109936.8-201ENST00000641772 604 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 AC106881.1-201ENST00000605849 3329 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.82□□□□□ -0.2
CTLA4P16410 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 ZBED1P1-201ENST00000502364 1930 ntBASIC13.82□□□□□ -0.2
CTLA4P16410 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTLA4P16410 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
CTLA4P16410 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTLA4P16410 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.81□□□□□ -0.2
CTLA4P16410 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.81□□□□□ -0.2
CTLA4P16410 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CTLA4P16410 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.81□□□□□ -0.2
CTLA4P16410 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 AC027369.6-201ENST00000525520 931 ntBASIC13.81□□□□□ -0.2
CTLA4P16410 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.81□□□□□ -0.2
CTLA4P16410 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.81□□□□□ -0.2
CTLA4P16410 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.81□□□□□ -0.2
CTLA4P16410 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.81□□□□□ -0.2
CTLA4P16410 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
CTLA4P16410 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTLA4P16410 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTLA4P16410 CICP23-201ENST00000605013 2741 ntBASIC13.81□□□□□ -0.2
CTLA4P16410 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTLA4P16410 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTLA4P16410 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms