Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PPP3CBP16298 AL592424.1-201ENST00000563624 1536 ntBASIC14.04□□□□□ -0.16
PPP3CBP16298 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PPP3CBP16298 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.04□□□□□ -0.16
PPP3CBP16298 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PPP3CBP16298 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PPP3CBP16298 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PPP3CBP16298 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PPP3CBP16298 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.04□□□□□ -0.16
PPP3CBP16298 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PPP3CBP16298 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
PPP3CBP16298 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.04□□□□□ -0.16
PPP3CBP16298 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PPP3CBP16298 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.03□□□□□ -0.16
PPP3CBP16298 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.03□□□□□ -0.16
PPP3CBP16298 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.03□□□□□ -0.16
PPP3CBP16298 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.03□□□□□ -0.16
PPP3CBP16298 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.03□□□□□ -0.16
PPP3CBP16298 AC244107.1-201ENST00000442033 332 ntBASIC14.03□□□□□ -0.16
PPP3CBP16298 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.03□□□□□ -0.16
PPP3CBP16298 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.03□□□□□ -0.16
PPP3CBP16298 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.03□□□□□ -0.16
PPP3CBP16298 AP005018.1-201ENST00000525475 301 ntBASIC14.03□□□□□ -0.16
PPP3CBP16298 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 AC104794.3-201ENST00000566840 1248 ntBASIC14.03□□□□□ -0.16
PPP3CBP16298 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.03□□□□□ -0.16
PPP3CBP16298 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
PPP3CBP16298 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.03□□□□□ -0.16
PPP3CBP16298 AC074044.1-201ENST00000609673 707 ntBASIC14.03□□□□□ -0.16
PPP3CBP16298 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.03□□□□□ -0.16
PPP3CBP16298 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
PPP3CBP16298 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 CYP4F24P-201ENST00000586049 1580 ntBASIC14.03□□□□□ -0.16
PPP3CBP16298 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.03□□□□□ -0.16
PPP3CBP16298 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PPP3CBP16298 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PPP3CBP16298 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.02□□□□□ -0.16
PPP3CBP16298 C8orf49-201ENST00000525043 1968 ntBASIC14.02□□□□□ -0.16
PPP3CBP16298 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 AC007292.2-201ENST00000593524 1812 ntBASIC14.02□□□□□ -0.16
PPP3CBP16298 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PPP3CBP16298 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.02□□□□□ -0.16
PPP3CBP16298 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PPP3CBP16298 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PPP3CBP16298 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PPP3CBP16298 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PPP3CBP16298 SPDYE19P-201ENST00000338590 713 ntBASIC14.02□□□□□ -0.17
PPP3CBP16298 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.02□□□□□ -0.17
PPP3CBP16298 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.02□□□□□ -0.17
PPP3CBP16298 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PPP3CBP16298 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PPP3CBP16298 NME2P1-201ENST00000426182 414 ntBASIC14.02□□□□□ -0.17
PPP3CBP16298 KRT17P7-201ENST00000451704 1104 ntBASIC14.02□□□□□ -0.17
PPP3CBP16298 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.02□□□□□ -0.17
PPP3CBP16298 AC055876.2-201ENST00000531834 546 ntBASIC14.02□□□□□ -0.17
PPP3CBP16298 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.02□□□□□ -0.17
PPP3CBP16298 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PPP3CBP16298 TIMM17BP1-201ENST00000545713 516 ntBASIC14.02□□□□□ -0.17
PPP3CBP16298 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms