Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.55□□□□□ -0.08
CCL4P13236 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.55□□□□□ -0.08
CCL4P13236 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.55□□□□□ -0.08
CCL4P13236 EIF3FP3-201ENST00000434851 1086 ntBASIC14.55□□□□□ -0.08
CCL4P13236 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 FAM8A4P-201ENST00000435433 1213 ntBASIC14.55□□□□□ -0.08
CCL4P13236 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.55□□□□□ -0.08
CCL4P13236 AL603832.2-201ENST00000566195 2125 ntBASIC14.55□□□□□ -0.08
CCL4P13236 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 KRT8P14-201ENST00000414254 1442 ntBASIC14.55□□□□□ -0.08
CCL4P13236 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL4P13236 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 AL645937.2-201ENST00000396808 931 ntBASIC14.54□□□□□ -0.08
CCL4P13236 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 MIR663B-201ENST00000408361 115 ntBASIC14.54□□□□□ -0.08
CCL4P13236 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.54□□□□□ -0.08
CCL4P13236 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 COX5BP1-201ENST00000507622 393 ntBASIC14.54□□□□□ -0.08
CCL4P13236 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL4P13236 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL4P13236 RHOQP1-201ENST00000555758 579 ntBASIC14.54□□□□□ -0.08
CCL4P13236 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CCL4P13236 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.54□□□□□ -0.08
CCL4P13236 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.54□□□□□ -0.08
CCL4P13236 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCL4P13236 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.54□□□□□ -0.08
CCL4P13236 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCL4P13236 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.54□□□□□ -0.08
CCL4P13236 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
CCL4P13236 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCL4P13236 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL4P13236 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CCL4P13236 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL4P13236 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL4P13236 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CCL4P13236 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CCL4P13236 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CCL4P13236 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms