Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 FO681548.1-201ENST00000455617 1132 ntBASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 AC005252.2-201ENST00000624630 1141 ntBASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC134312.5-201ENST00000568031 1313 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC126177.1-201ENST00000547829 2218 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC092933.1-201ENST00000393644 945 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 RPL7P3-201ENST00000441388 714 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC093433.1-201ENST00000458048 571 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AP000812.2-201ENST00000538934 718 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AC015910.1-201ENST00000579400 975 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AL033527.4-201ENST00000641026 673 ntBASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40ALP0C0E4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms