Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.1□□□□□ -0.15
FREM3P0C091 AC106886.1-201ENST00000568660 600 ntBASIC14.1□□□□□ -0.15
FREM3P0C091 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.1□□□□□ -0.15
FREM3P0C091 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FREM3P0C091 AC000095.1-201ENST00000603208 874 ntBASIC14.1□□□□□ -0.15
FREM3P0C091 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.1□□□□□ -0.15
FREM3P0C091 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.1□□□□□ -0.15
FREM3P0C091 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.1□□□□□ -0.15
FREM3P0C091 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FREM3P0C091 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.1□□□□□ -0.15
FREM3P0C091 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
FREM3P0C091 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FREM3P0C091 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
FREM3P0C091 SOCS2P1-201ENST00000417727 557 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.09□□□□□ -0.15
FREM3P0C091 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.09□□□□□ -0.15
FREM3P0C091 KRT17P7-201ENST00000451704 1104 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.09□□□□□ -0.15
FREM3P0C091 KRT17P8-201ENST00000540749 863 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
FREM3P0C091 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.09□□□□□ -0.15
FREM3P0C091 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.09□□□□□ -0.15
FREM3P0C091 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 NFIC-211ENST00000641145 8399 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FREM3P0C091 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 AL109954.1-202ENST00000564051 2148 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
FREM3P0C091 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.09□□□□□ -0.15
FREM3P0C091 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 AC234783.1-201ENST00000441761 496 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.09□□□□□ -0.15
FREM3P0C091 AC092552.1-201ENST00000547243 906 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.09□□□□□ -0.15
FREM3P0C091 AC093813.1-201ENST00000605066 256 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 AL008721.1-201ENST00000609964 604 ntBASIC14.09□□□□□ -0.15
FREM3P0C091 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
FREM3P0C091 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FREM3P0C091 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FREM3P0C091 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FREM3P0C091 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.08□□□□□ -0.15
FREM3P0C091 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FREM3P0C091 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
FREM3P0C091 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.08□□□□□ -0.15
FREM3P0C091 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FREM3P0C091 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.08□□□□□ -0.15
FREM3P0C091 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FREM3P0C091 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FREM3P0C091 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FREM3P0C091 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.08□□□□□ -0.16
FREM3P0C091 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 ANKRD19P-201ENST00000338192 862 ntBASIC14.08□□□□□ -0.16
FREM3P0C091 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.08□□□□□ -0.16
FREM3P0C091 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.08□□□□□ -0.16
FREM3P0C091 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms