Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
HOXC4P09017 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HOXC4P09017 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HOXC4P09017 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HOXC4P09017 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.03■□□□□ -0
HOXC4P09017 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HOXC4P09017 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.03■□□□□ -0
HOXC4P09017 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HOXC4P09017 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.03■□□□□ -0
HOXC4P09017 AC245100.3-201ENST00000441281 285 ntBASIC15.03■□□□□ -0
HOXC4P09017 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 AL355994.2-201ENST00000447882 704 ntBASIC15.03■□□□□ -0
HOXC4P09017 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.03■□□□□ -0
HOXC4P09017 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.03■□□□□ -0
HOXC4P09017 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.03■□□□□ -0
HOXC4P09017 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HOXC4P09017 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HOXC4P09017 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.03■□□□□ -0
HOXC4P09017 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.03■□□□□ -0
HOXC4P09017 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HOXC4P09017 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HOXC4P09017 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
HOXC4P09017 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HOXC4P09017 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.02■□□□□ -0
HOXC4P09017 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 AP003680.1-201ENST00000598970 3660 ntBASIC15.02■□□□□ -0
HOXC4P09017 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 AC087481.3-201ENST00000602886 1894 ntBASIC15.02■□□□□ -0
HOXC4P09017 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HOXC4P09017 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.02■□□□□ -0
HOXC4P09017 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.02■□□□□ -0
HOXC4P09017 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
HOXC4P09017 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.02■□□□□ -0
HOXC4P09017 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.02■□□□□ -0
HOXC4P09017 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC4P09017 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.02■□□□□ -0
HOXC4P09017 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.02■□□□□ -0
HOXC4P09017 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.02■□□□□ -0
HOXC4P09017 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.02■□□□□ -0
HOXC4P09017 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HOXC4P09017 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HOXC4P09017 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.02□□□□□ -0.01
HOXC4P09017 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HOXC4P09017 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.02□□□□□ -0.01
HOXC4P09017 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC4P09017 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HOXC4P09017 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HOXC4P09017 TMBIM7P-203ENST00000641617 1718 ntBASIC15.01□□□□□ -0.01
HOXC4P09017 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.01□□□□□ -0.01
HOXC4P09017 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.01□□□□□ -0.01
HOXC4P09017 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.01□□□□□ -0.01
HOXC4P09017 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.01□□□□□ -0.01
HOXC4P09017 AC010328.2-201ENST00000597698 1111 ntBASIC15.01□□□□□ -0.01
HOXC4P09017 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.01□□□□□ -0.01
HOXC4P09017 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HOXC4P09017 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms