Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM2P07951 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM2P07951 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM2P07951 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM2P07951 AL359881.3-201ENST00000602640 1721 ntBASIC17.81■□□□□ 0.44
TPM2P07951 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM2P07951 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TPM2P07951 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 AC009947.1-201ENST00000444350 727 ntBASIC17.8■□□□□ 0.44
TPM2P07951 HCG4B-203ENST00000450128 991 ntBASIC17.8■□□□□ 0.44
TPM2P07951 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.8■□□□□ 0.44
TPM2P07951 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 RN7SL510P-201ENST00000581311 263 ntBASIC17.8■□□□□ 0.44
TPM2P07951 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 MIR7706-201ENST00000613747 67 ntBASIC17.8■□□□□ 0.44
TPM2P07951 AC010507.1-201ENST00000633895 436 ntBASIC17.8■□□□□ 0.44
TPM2P07951 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
TPM2P07951 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM2P07951 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM2P07951 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM2P07951 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM2P07951 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 PMS2P7-201ENST00000506558 1336 ntBASIC17.79■□□□□ 0.44
TPM2P07951 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM2P07951 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TPM2P07951 IGLL3P-201ENST00000412472 434 ntBASIC17.79■□□□□ 0.44
TPM2P07951 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM2P07951 AC092474.2-201ENST00000424288 719 ntBASIC17.79■□□□□ 0.44
TPM2P07951 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.79■□□□□ 0.44
TPM2P07951 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM2P07951 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TPM2P07951 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM2P07951 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM2P07951 AC116407.3-201ENST00000623905 1129 ntBASIC17.79■□□□□ 0.44
TPM2P07951 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM2P07951 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM2P07951 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TPM2P07951 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM2P07951 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM2P07951 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM2P07951 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TPM2P07951 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TPM2P07951 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.78■□□□□ 0.44
TPM2P07951 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM2P07951 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
TPM2P07951 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TPM2P07951 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM2P07951 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM2P07951 Z82170.1-201ENST00000625081 3192 ntBASIC17.78■□□□□ 0.44
TPM2P07951 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms