Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.28■□□□□ 0.2
RB1P06400 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RB1P06400 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.28■□□□□ 0.2
RB1P06400 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RB1P06400 TUBB8P8-201ENST00000458717 1058 ntBASIC16.28■□□□□ 0.2
RB1P06400 FTLP10-202ENST00000505798 471 ntBASIC16.28■□□□□ 0.2
RB1P06400 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.28■□□□□ 0.2
RB1P06400 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.28■□□□□ 0.2
RB1P06400 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.28■□□□□ 0.2
RB1P06400 RN7SL163P-201ENST00000583100 276 ntBASIC16.28■□□□□ 0.2
RB1P06400 BNIP3P13-201ENST00000599968 566 ntBASIC16.28■□□□□ 0.2
RB1P06400 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.28■□□□□ 0.2
RB1P06400 MIR7845-201ENST00000618396 99 ntBASIC16.28■□□□□ 0.2
RB1P06400 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.28■□□□□ 0.2
RB1P06400 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RB1P06400 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RB1P06400 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RB1P06400 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RB1P06400 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.28■□□□□ 0.2
RB1P06400 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RB1P06400 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RB1P06400 AC008132.1-202ENST00000342005 1389 ntBASIC16.27■□□□□ 0.2
RB1P06400 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.27■□□□□ 0.2
RB1P06400 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.27■□□□□ 0.2
RB1P06400 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RB1P06400 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.27■□□□□ 0.2
RB1P06400 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.27■□□□□ 0.2
RB1P06400 EEF1DP6-201ENST00000449232 372 ntBASIC16.27■□□□□ 0.2
RB1P06400 AP003171.2-201ENST00000528208 925 ntBASIC16.27■□□□□ 0.2
RB1P06400 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
RB1P06400 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RB1P06400 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.27■□□□□ 0.2
RB1P06400 AC013355.1-201ENST00000562625 723 ntBASIC16.27■□□□□ 0.2
RB1P06400 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.27■□□□□ 0.2
RB1P06400 RN7SL574P-201ENST00000581512 297 ntBASIC16.27■□□□□ 0.2
RB1P06400 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RB1P06400 AC026740.1-201ENST00000607068 791 ntBASIC16.27■□□□□ 0.2
RB1P06400 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.27■□□□□ 0.2
RB1P06400 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RB1P06400 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RB1P06400 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.27■□□□□ 0.19
RB1P06400 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.27■□□□□ 0.19
RB1P06400 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
RB1P06400 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RB1P06400 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RB1P06400 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RB1P06400 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RB1P06400 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RB1P06400 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RB1P06400 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RB1P06400 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RB1P06400 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
RB1P06400 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RB1P06400 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.26■□□□□ 0.19
RB1P06400 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms