Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 AL391825.1-201ENST00000457671 1364 ntBASIC16.69■□□□□ 0.26
HLA-DRAP01903 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 PIN1P1-201ENST00000412108 996 ntBASIC16.69■□□□□ 0.26
HLA-DRAP01903 AL353779.1-201ENST00000434793 351 ntBASIC16.69■□□□□ 0.26
HLA-DRAP01903 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 VDAC1P7-201ENST00000462417 847 ntBASIC16.69■□□□□ 0.26
HLA-DRAP01903 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 AC123567.1-201ENST00000548294 1261 ntBASIC16.69■□□□□ 0.26
HLA-DRAP01903 AC190387.1-201ENST00000551683 408 ntBASIC16.69■□□□□ 0.26
HLA-DRAP01903 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DRAP01903 DRD5P1-201ENST00000456605 1438 ntBASIC16.69■□□□□ 0.26
HLA-DRAP01903 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRAP01903 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 AC091951.1-201ENST00000512854 2465 ntBASIC16.68■□□□□ 0.26
HLA-DRAP01903 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 AC087499.6-201ENST00000411576 835 ntBASIC16.68■□□□□ 0.26
HLA-DRAP01903 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 GAPDHP40-201ENST00000505218 1006 ntBASIC16.68■□□□□ 0.26
HLA-DRAP01903 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 BRI3BPP1-201ENST00000594224 787 ntBASIC16.68■□□□□ 0.26
HLA-DRAP01903 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.68■□□□□ 0.26
HLA-DRAP01903 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 AC007431.3-201ENST00000623221 587 ntBASIC16.68■□□□□ 0.26
HLA-DRAP01903 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DRAP01903 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRAP01903 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms