Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG5O95196 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.72■□□□□ 0.27
CSPG5O95196 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.72■□□□□ 0.27
CSPG5O95196 KRT8P13-201ENST00000463294 1010 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 POU5F1P6-201ENST00000466990 990 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.72■□□□□ 0.27
CSPG5O95196 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG5O95196 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 AP001258.2-201ENST00000529891 490 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 AC078819.1-201ENST00000547454 765 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 AC012085.1-201ENST00000548270 765 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 HNRNPUP1-201ENST00000554987 333 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG5O95196 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.72■□□□□ 0.27
CSPG5O95196 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 AC107373.2-201ENST00000607735 490 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.72■□□□□ 0.27
CSPG5O95196 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG5O95196 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CSPG5O95196 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CSPG5O95196 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CSPG5O95196 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG5O95196 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CSPG5O95196 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG5O95196 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.71■□□□□ 0.27
CSPG5O95196 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.71■□□□□ 0.27
CSPG5O95196 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CSPG5O95196 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 TOMM22P5-201ENST00000416399 439 ntBASIC16.71■□□□□ 0.27
CSPG5O95196 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.71■□□□□ 0.27
CSPG5O95196 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.71■□□□□ 0.27
CSPG5O95196 Z93015.1-201ENST00000451718 390 ntBASIC16.71■□□□□ 0.27
CSPG5O95196 PHKG1P2-201ENST00000457537 863 ntBASIC16.71■□□□□ 0.27
CSPG5O95196 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.71■□□□□ 0.27
CSPG5O95196 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.71■□□□□ 0.27
CSPG5O95196 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 AL450472.2-201ENST00000603663 1156 ntBASIC16.71■□□□□ 0.27
CSPG5O95196 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.71■□□□□ 0.27
CSPG5O95196 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.71■□□□□ 0.27
CSPG5O95196 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG5O95196 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG5O95196 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms