Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.96□□□□□ -0.01
SEMA3DO95025 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SEMA3DO95025 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 AC015922.1-201ENST00000421102 1152 ntBASIC14.96□□□□□ -0.01
SEMA3DO95025 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.96□□□□□ -0.01
SEMA3DO95025 AC092580.3-201ENST00000430932 139 ntBASIC14.96□□□□□ -0.01
SEMA3DO95025 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.96□□□□□ -0.01
SEMA3DO95025 METTL21AP1-201ENST00000438852 635 ntBASIC14.96□□□□□ -0.01
SEMA3DO95025 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.96□□□□□ -0.01
SEMA3DO95025 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.96□□□□□ -0.01
SEMA3DO95025 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.96□□□□□ -0.01
SEMA3DO95025 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.96□□□□□ -0.01
SEMA3DO95025 AC027369.6-201ENST00000525520 931 ntBASIC14.96□□□□□ -0.01
SEMA3DO95025 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.96□□□□□ -0.01
SEMA3DO95025 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.96□□□□□ -0.01
SEMA3DO95025 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.96□□□□□ -0.01
SEMA3DO95025 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SEMA3DO95025 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SEMA3DO95025 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.96□□□□□ -0.01
SEMA3DO95025 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.96□□□□□ -0.01
SEMA3DO95025 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEMA3DO95025 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SEMA3DO95025 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SEMA3DO95025 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEMA3DO95025 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEMA3DO95025 AC138035.3-201ENST00000622706 2791 ntBASIC14.96□□□□□ -0.02
SEMA3DO95025 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEMA3DO95025 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.95□□□□□ -0.02
SEMA3DO95025 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AC084364.1-201ENST00000551967 1556 ntBASIC14.95□□□□□ -0.02
SEMA3DO95025 AC104581.4-201ENST00000623126 3052 ntBASIC14.95□□□□□ -0.02
SEMA3DO95025 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AL133267.1-201ENST00000398220 340 ntBASIC14.95□□□□□ -0.02
SEMA3DO95025 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
SEMA3DO95025 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AL844908.2-201ENST00000609461 460 ntBASIC14.95□□□□□ -0.02
SEMA3DO95025 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 SNX18-202ENST00000343017 3140 ntBASIC14.95□□□□□ -0.02
SEMA3DO95025 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SEMA3DO95025 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.95□□□□□ -0.02
SEMA3DO95025 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEMA3DO95025 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.94□□□□□ -0.02
SEMA3DO95025 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SEMA3DO95025 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.94□□□□□ -0.02
SEMA3DO95025 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEMA3DO95025 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEMA3DO95025 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEMA3DO95025 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEMA3DO95025 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SEMA3DO95025 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SEMA3DO95025 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms