Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.21□□□□□ -0.45
ZNF253O75346 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 REXO1L2P-201ENST00000425429 2069 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.21□□□□□ -0.46
ZNF253O75346 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.21□□□□□ -0.46
ZNF253O75346 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.46
ZNF253O75346 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
ZNF253O75346 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.21□□□□□ -0.46
ZNF253O75346 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.21□□□□□ -0.46
ZNF253O75346 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.21□□□□□ -0.46
ZNF253O75346 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
ZNF253O75346 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF253O75346 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 AC105250.1-201ENST00000509378 2057 ntBASIC12.2□□□□□ -0.46
ZNF253O75346 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
ZNF253O75346 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.2□□□□□ -0.46
ZNF253O75346 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF253O75346 EMBP1-201ENST00000458200 901 ntBASIC12.2□□□□□ -0.46
ZNF253O75346 UNC93B7-201ENST00000509439 705 ntBASIC12.2□□□□□ -0.46
ZNF253O75346 AC079776.4-201ENST00000511039 504 ntBASIC12.2□□□□□ -0.46
ZNF253O75346 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.2□□□□□ -0.46
ZNF253O75346 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ZNF253O75346 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF253O75346 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 AC024267.1-201ENST00000582320 895 ntBASIC12.2□□□□□ -0.46
ZNF253O75346 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
ZNF253O75346 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 AC012313.10-201ENST00000623509 926 ntBASIC12.2□□□□□ -0.46
ZNF253O75346 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF253O75346 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
ZNF253O75346 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ZNF253O75346 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF253O75346 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 AL031595.1-201ENST00000623969 4709 ntBASIC12.19□□□□□ -0.46
ZNF253O75346 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF253O75346 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ZNF253O75346 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms