Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.05■□□□□ 0.48
CTNND1O60716 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNND1O60716 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.05■□□□□ 0.48
CTNND1O60716 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTNND1O60716 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.05■□□□□ 0.48
CTNND1O60716 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.05■□□□□ 0.48
CTNND1O60716 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.05■□□□□ 0.48
CTNND1O60716 AL096828.3-201ENST00000615354 462 ntBASIC18.05■□□□□ 0.48
CTNND1O60716 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNND1O60716 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNND1O60716 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.04■□□□□ 0.48
CTNND1O60716 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CTNND1O60716 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.04■□□□□ 0.48
CTNND1O60716 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 AC138028.6-201ENST00000616106 1482 ntBASIC18.04■□□□□ 0.48
CTNND1O60716 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTNND1O60716 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CTNND1O60716 MIR663B-201ENST00000408361 115 ntBASIC18.04■□□□□ 0.48
CTNND1O60716 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.04■□□□□ 0.48
CTNND1O60716 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.04■□□□□ 0.48
CTNND1O60716 AC091804.1-201ENST00000486888 567 ntBASIC18.04■□□□□ 0.48
CTNND1O60716 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.04■□□□□ 0.48
CTNND1O60716 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.04■□□□□ 0.48
CTNND1O60716 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.04■□□□□ 0.48
CTNND1O60716 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTNND1O60716 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTNND1O60716 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.04■□□□□ 0.48
CTNND1O60716 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.04■□□□□ 0.48
CTNND1O60716 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.04■□□□□ 0.48
CTNND1O60716 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 KRT8P14-201ENST00000414254 1442 ntBASIC18.04■□□□□ 0.48
CTNND1O60716 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.04■□□□□ 0.48
CTNND1O60716 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTNND1O60716 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNND1O60716 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.03■□□□□ 0.48
CTNND1O60716 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.03■□□□□ 0.48
CTNND1O60716 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 AL645728.2-202ENST00000641679 227 ntBASIC18.03■□□□□ 0.48
CTNND1O60716 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.03■□□□□ 0.48
CTNND1O60716 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms