Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC000095.1-201ENST00000603208 874 ntBASIC19.17■□□□□ 0.66
SMARCA5O60264 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCA5O60264 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SMARCA5O60264 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SMARCA5O60264 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SMARCA5O60264 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCA5O60264 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCA5O60264 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 FER1L4-210ENST00000615531 5998 ntBASIC19.16■□□□□ 0.66
SMARCA5O60264 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMARCA5O60264 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMARCA5O60264 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMARCA5O60264 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMARCA5O60264 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.16■□□□□ 0.66
SMARCA5O60264 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMARCA5O60264 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.16■□□□□ 0.66
SMARCA5O60264 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.16■□□□□ 0.66
SMARCA5O60264 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCA5O60264 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMARCA5O60264 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 LINC02560-201ENST00000596379 459 ntBASIC19.16■□□□□ 0.66
SMARCA5O60264 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMARCA5O60264 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.16■□□□□ 0.66
SMARCA5O60264 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMARCA5O60264 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCA5O60264 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SMARCA5O60264 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCA5O60264 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCA5O60264 AC098850.1-201ENST00000419919 790 ntBASIC19.15■□□□□ 0.66
SMARCA5O60264 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCA5O60264 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.15■□□□□ 0.66
SMARCA5O60264 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.15■□□□□ 0.66
SMARCA5O60264 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCA5O60264 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SMARCA5O60264 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCA5O60264 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.15■□□□□ 0.66
SMARCA5O60264 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCA5O60264 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SMARCA5O60264 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMARCA5O60264 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCA5O60264 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCA5O60264 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.14■□□□□ 0.66
SMARCA5O60264 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.14■□□□□ 0.66
SMARCA5O60264 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCA5O60264 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCA5O60264 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms