Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC015911.4-201ENST00000588022 1070 ntBASIC17.45■□□□□ 0.38
ACTN4O43707 AC074044.1-201ENST00000609673 707 ntBASIC17.45■□□□□ 0.38
ACTN4O43707 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.45■□□□□ 0.38
ACTN4O43707 AC073592.8-201ENST00000624126 511 ntBASIC17.45■□□□□ 0.38
ACTN4O43707 AL109936.8-201ENST00000641772 604 ntBASIC17.45■□□□□ 0.38
ACTN4O43707 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ACTN4O43707 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 NORAD-201ENST00000565493 5339 ntBASIC17.45■□□□□ 0.38
ACTN4O43707 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.45■□□□□ 0.38
ACTN4O43707 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ACTN4O43707 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.45■□□□□ 0.38
ACTN4O43707 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ACTN4O43707 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ACTN4O43707 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ACTN4O43707 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.44■□□□□ 0.38
ACTN4O43707 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ACTN4O43707 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.44■□□□□ 0.38
ACTN4O43707 AL121723.1-201ENST00000445194 1519 ntBASIC17.44■□□□□ 0.38
ACTN4O43707 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ACTN4O43707 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 AC092580.3-201ENST00000430932 139 ntBASIC17.44■□□□□ 0.38
ACTN4O43707 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 RN7SL618P-201ENST00000477850 296 ntBASIC17.44■□□□□ 0.38
ACTN4O43707 AC125807.1-201ENST00000483097 614 ntBASIC17.44■□□□□ 0.38
ACTN4O43707 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.44■□□□□ 0.38
ACTN4O43707 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 AL844908.2-201ENST00000609461 460 ntBASIC17.44■□□□□ 0.38
ACTN4O43707 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 REXO1L2P-201ENST00000425429 2069 ntBASIC17.44■□□□□ 0.38
ACTN4O43707 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ACTN4O43707 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.44■□□□□ 0.38
ACTN4O43707 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ACTN4O43707 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ACTN4O43707 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.43■□□□□ 0.38
ACTN4O43707 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.43■□□□□ 0.38
ACTN4O43707 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ACTN4O43707 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ACTN4O43707 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ACTN4O43707 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ACTN4O43707 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.43■□□□□ 0.38
ACTN4O43707 KLF2P3-201ENST00000451977 1087 ntBASIC17.43■□□□□ 0.38
ACTN4O43707 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.43■□□□□ 0.38
ACTN4O43707 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.43■□□□□ 0.38
ACTN4O43707 AC011467.4-201ENST00000594891 528 ntBASIC17.43■□□□□ 0.38
ACTN4O43707 AC025181.2-201ENST00000606994 802 ntBASIC17.43■□□□□ 0.38
ACTN4O43707 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.43■□□□□ 0.38
ACTN4O43707 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms