Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLOCKO15516 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CLOCKO15516 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 IGLL3P-201ENST00000412472 434 ntBASIC14.87□□□□□ -0.03
CLOCKO15516 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.87□□□□□ -0.03
CLOCKO15516 AL513480.1-201ENST00000451731 511 ntBASIC14.87□□□□□ -0.03
CLOCKO15516 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.87□□□□□ -0.03
CLOCKO15516 ALG1L5P-201ENST00000482043 771 ntBASIC14.87□□□□□ -0.03
CLOCKO15516 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CLOCKO15516 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.87□□□□□ -0.03
CLOCKO15516 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 SNHG9-202ENST00000564014 471 ntBASIC14.87□□□□□ -0.03
CLOCKO15516 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.87□□□□□ -0.03
CLOCKO15516 AC004877.2-201ENST00000623941 599 ntBASIC14.87□□□□□ -0.03
CLOCKO15516 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 AC023024.2-201ENST00000623561 1993 ntBASIC14.87□□□□□ -0.03
CLOCKO15516 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CLOCKO15516 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLOCKO15516 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.87□□□□□ -0.03
CLOCKO15516 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 AL589702.1-201ENST00000641229 1509 ntBASIC14.87□□□□□ -0.03
CLOCKO15516 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.87□□□□□ -0.03
CLOCKO15516 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 AC015656.1-201ENST00000624209 3578 ntBASIC14.86□□□□□ -0.03
CLOCKO15516 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.86□□□□□ -0.03
CLOCKO15516 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.86□□□□□ -0.03
CLOCKO15516 MIR4469-201ENST00000583919 79 ntBASIC14.86□□□□□ -0.03
CLOCKO15516 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CLOCKO15516 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLOCKO15516 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.86□□□□□ -0.03
CLOCKO15516 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLOCKO15516 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.85□□□□□ -0.03
CLOCKO15516 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLOCKO15516 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLOCKO15516 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CLOCKO15516 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLOCKO15516 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 354.2 ms