Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC18O15417 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC18O15417 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.26■□□□□ 0.19
TNRC18O15417 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC18O15417 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC18O15417 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.26■□□□□ 0.19
TNRC18O15417 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.26■□□□□ 0.19
TNRC18O15417 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.26■□□□□ 0.19
TNRC18O15417 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.26■□□□□ 0.19
TNRC18O15417 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.26■□□□□ 0.19
TNRC18O15417 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.26■□□□□ 0.19
TNRC18O15417 AL118522.1-201ENST00000611368 560 ntBASIC16.26■□□□□ 0.19
TNRC18O15417 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC18O15417 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC18O15417 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC18O15417 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 BICD1-207ENST00000551848 1962 ntBASIC16.25■□□□□ 0.19
TNRC18O15417 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 IFNWP2-201ENST00000431203 580 ntBASIC16.25■□□□□ 0.19
TNRC18O15417 ANKRD26P1-203ENST00000569528 966 ntBASIC16.25■□□□□ 0.19
TNRC18O15417 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 WASH3P-207ENST00000560956 1394 ntBASIC16.25■□□□□ 0.19
TNRC18O15417 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TNRC18O15417 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 MED15P3-201ENST00000413613 326 ntBASIC16.25■□□□□ 0.19
TNRC18O15417 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.25■□□□□ 0.19
TNRC18O15417 AP003040.1-201ENST00000532044 1024 ntBASIC16.25■□□□□ 0.19
TNRC18O15417 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC16.25■□□□□ 0.19
TNRC18O15417 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TNRC18O15417 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNRC18O15417 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.25■□□□□ 0.19
TNRC18O15417 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.24■□□□□ 0.19
TNRC18O15417 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 AL157414.3-201ENST00000624276 1954 ntBASIC16.24■□□□□ 0.19
TNRC18O15417 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.24■□□□□ 0.19
TNRC18O15417 GNG10P1-201ENST00000452289 199 ntBASIC16.24■□□□□ 0.19
TNRC18O15417 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 TPT1P11-201ENST00000458482 498 ntBASIC16.24■□□□□ 0.19
TNRC18O15417 B9D1-206ENST00000461069 923 ntTSL 2 BASIC16.24■□□□□ 0.19
TNRC18O15417 AC092910.2-201ENST00000491262 348 ntBASIC16.24■□□□□ 0.19
TNRC18O15417 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC16.24■□□□□ 0.19
TNRC18O15417 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
TNRC18O15417 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TNRC18O15417 TPST2P1-201ENST00000564073 1102 ntBASIC16.24■□□□□ 0.19
TNRC18O15417 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.24■□□□□ 0.19
TNRC18O15417 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.24■□□□□ 0.19
TNRC18O15417 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TNRC18O15417 REXO1L5P-201ENST00000622260 2098 ntBASIC16.24■□□□□ 0.19
TNRC18O15417 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TNRC18O15417 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 AC006529.1-201ENST00000459978 637 ntBASIC16.24■□□□□ 0.19
TNRC18O15417 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.24■□□□□ 0.19
TNRC18O15417 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TNRC18O15417 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.24■□□□□ 0.19
TNRC18O15417 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.24■□□□□ 0.19
TNRC18O15417 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNRC18O15417 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TNRC18O15417 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC16.23■□□□□ 0.19
TNRC18O15417 AL773545.2-201ENST00000442149 472 ntBASIC16.23■□□□□ 0.19
TNRC18O15417 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.23■□□□□ 0.19
TNRC18O15417 RN7SL87P-201ENST00000497657 288 ntBASIC16.23■□□□□ 0.19
TNRC18O15417 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TNRC18O15417 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.23■□□□□ 0.19
TNRC18O15417 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNRC18O15417 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.23■□□□□ 0.19
TNRC18O15417 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.23■□□□□ 0.19
TNRC18O15417 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.23■□□□□ 0.19
TNRC18O15417 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.23■□□□□ 0.19
TNRC18O15417 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNRC18O15417 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.23■□□□□ 0.19
TNRC18O15417 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.23■□□□□ 0.19
TNRC18O15417 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNRC18O15417 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNRC18O15417 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNRC18O15417 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms