Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN1O15353 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
FOXN1O15353 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
FOXN1O15353 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN1O15353 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN1O15353 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
FOXN1O15353 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 C1QBPP1-201ENST00000400117 770 ntBASIC18.51■□□□□ 0.55
FOXN1O15353 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN1O15353 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXN1O15353 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN1O15353 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
FOXN1O15353 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXN1O15353 AC126915.1-201ENST00000522847 1038 ntBASIC18.51■□□□□ 0.55
FOXN1O15353 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 AC078819.1-201ENST00000547454 765 ntBASIC18.51■□□□□ 0.55
FOXN1O15353 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 AC012085.1-201ENST00000548270 765 ntBASIC18.51■□□□□ 0.55
FOXN1O15353 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXN1O15353 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXN1O15353 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN1O15353 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXN1O15353 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
FOXN1O15353 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXN1O15353 AC009084.3-201ENST00000623356 437 ntBASIC18.51■□□□□ 0.55
FOXN1O15353 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
FOXN1O15353 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXN1O15353 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
FOXN1O15353 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN1O15353 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN1O15353 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 AC005622.1-201ENST00000636801 1703 ntBASIC18.5■□□□□ 0.55
FOXN1O15353 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.5■□□□□ 0.55
FOXN1O15353 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXN1O15353 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXN1O15353 AC135983.4-201ENST00000564116 1262 ntBASIC18.5■□□□□ 0.55
FOXN1O15353 AC141586.1-203ENST00000567242 366 ntBASIC18.5■□□□□ 0.55
FOXN1O15353 AC120045.2-201ENST00000567334 178 ntBASIC18.5■□□□□ 0.55
FOXN1O15353 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXN1O15353 RN7SL574P-201ENST00000581512 297 ntBASIC18.5■□□□□ 0.55
FOXN1O15353 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FOXN1O15353 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.5■□□□□ 0.55
FOXN1O15353 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.5■□□□□ 0.55
FOXN1O15353 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN1O15353 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXN1O15353 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN1O15353 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXN1O15353 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN1O15353 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms