Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
USP9YO00507 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
USP9YO00507 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.19□□□□□ -0.3
USP9YO00507 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 AL157813.1-201ENST00000612996 587 ntBASIC13.19□□□□□ -0.3
USP9YO00507 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
USP9YO00507 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.19□□□□□ -0.3
USP9YO00507 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.19□□□□□ -0.3
USP9YO00507 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 LINC01815-202ENST00000641468 1409 ntBASIC13.19□□□□□ -0.3
USP9YO00507 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
USP9YO00507 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
USP9YO00507 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 HLA-DPA2-205ENST00000433582 733 ntBASIC13.19□□□□□ -0.3
USP9YO00507 VDAC1P1-201ENST00000439229 848 ntBASIC13.19□□□□□ -0.3
USP9YO00507 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.19□□□□□ -0.3
USP9YO00507 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.19□□□□□ -0.3
USP9YO00507 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
USP9YO00507 PEBP1P2-201ENST00000603980 558 ntBASIC13.19□□□□□ -0.3
USP9YO00507 AL158070.2-201ENST00000623713 1621 ntBASIC13.19□□□□□ -0.3
USP9YO00507 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9YO00507 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9YO00507 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP9YO00507 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 AC011676.5-201ENST00000624864 2660 ntBASIC13.18□□□□□ -0.3
USP9YO00507 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 AC009093.2-202ENST00000620513 2079 ntBASIC13.18□□□□□ -0.3
USP9YO00507 AC141586.5-201ENST00000624546 2050 ntBASIC13.18□□□□□ -0.3
USP9YO00507 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP9YO00507 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 HIST2H2BA-201ENST00000412169 381 ntBASIC13.18□□□□□ -0.3
USP9YO00507 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.18□□□□□ -0.3
USP9YO00507 AC004522.1-201ENST00000419978 654 ntBASIC13.18□□□□□ -0.3
USP9YO00507 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.18□□□□□ -0.3
USP9YO00507 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9YO00507 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.18□□□□□ -0.3
USP9YO00507 AC233280.19-201ENST00000633223 136 ntBASIC13.18□□□□□ -0.3
USP9YO00507 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9YO00507 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 AC022188.1-201ENST00000620960 1664 ntBASIC13.18□□□□□ -0.3
USP9YO00507 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 AC239868.1-201ENST00000369385 493 ntBASIC13.18□□□□□ -0.3
USP9YO00507 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9YO00507 MRPL22P1-201ENST00000505398 616 ntBASIC13.18□□□□□ -0.3
USP9YO00507 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.18□□□□□ -0.3
USP9YO00507 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.18□□□□□ -0.3
USP9YO00507 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9YO00507 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC13.18□□□□□ -0.3
USP9YO00507 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9YO00507 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9YO00507 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9YO00507 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms