Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.95□□□□□ -0.66
LINC01546A6NGU7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 AC020658.7-201ENST00000624274 2442 ntBASIC10.95□□□□□ -0.66
LINC01546A6NGU7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 PRSS29P-201ENST00000440800 595 ntBASIC10.95□□□□□ -0.66
LINC01546A6NGU7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 AC008608.2-201ENST00000606089 416 ntBASIC10.95□□□□□ -0.66
LINC01546A6NGU7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 AC004790.2-201ENST00000623588 572 ntBASIC10.95□□□□□ -0.66
LINC01546A6NGU7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 AGGF1P1-201ENST00000509500 2073 ntBASIC10.94□□□□□ -0.66
LINC01546A6NGU7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 AC108073.2-201ENST00000464002 357 ntBASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 NPAP1P7-201ENST00000613027 823 ntBASIC10.94□□□□□ -0.66
LINC01546A6NGU7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms