Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AC108725.1-201ENST00000495472 409 ntBASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 AC091271.1-201ENST00000611877 1162 ntBASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 LINC02199-201ENST00000506655 2702 ntBASIC15.73■□□□□ 0.11
TBC1D3BA6NDS4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 AHCYP2-201ENST00000430630 1300 ntBASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 RNA5SP486-201ENST00000515961 83 ntBASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 AL138709.1-201ENST00000614840 1693 ntBASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3BA6NDS4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TBC1D3BA6NDS4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms