Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCH2Q9Y6C5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCH2Q9Y6C5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTCH2Q9Y6C5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCH2Q9Y6C5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTCH2Q9Y6C5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCH2Q9Y6C5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 MIR1227-201ENST00000408484 88 ntBASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 GHSR-202ENST00000427970 912 ntBASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 TUBB8P8-201ENST00000458717 1058 ntBASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 NKILA-202ENST00000614771 2598 ntBASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 LTB4R2-202ENST00000528054 3092 ntBASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
PTCH2Q9Y6C5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCH2Q9Y6C5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 KRT8P14-201ENST00000414254 1442 ntBASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 AC090164.2-201ENST00000611487 516 ntBASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 AC005052.1-201ENST00000625181 2492 ntBASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PTCH2Q9Y6C5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 AC097065.1-201ENST00000425737 517 ntBASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 AC005357.2-202ENST00000590507 1060 ntBASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 YRDCP1-201ENST00000621419 643 ntBASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms