Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 RRP7BP-205ENST00000566851 833 ntBASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 AL391825.1-201ENST00000457671 1364 ntBASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 AL512384.1-201ENST00000406683 331 ntBASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 AC087499.6-201ENST00000411576 835 ntBASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 RN7SL752P-201ENST00000463779 287 ntBASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 KRT17P8-201ENST00000540749 863 ntBASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 CHCHD2P3-201ENST00000603038 451 ntBASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RAI2Q9Y5P3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 RAB43P1-201ENST00000561790 589 ntBASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms