Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 AC068587.6-202ENST00000641839 5619 ntBASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
RIMS3Q9UJD0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 BNIP3P1-202ENST00000550043 1585 ntBASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RIMS3Q9UJD0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 AC007967.2-201ENST00000432613 625 ntBASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 AC074386.1-202ENST00000463561 864 ntBASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 AC068137.2-201ENST00000605408 478 ntBASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 AL359881.3-201ENST00000602640 1721 ntBASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIMS3Q9UJD0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 AC002056.1-201ENST00000395613 760 ntBASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.76□□□□□ -0.05
RIMS3Q9UJD0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms