Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 BNIP3P42-201ENST00000454982 569 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 AC092658.1-201ENST00000505836 891 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 MIR5189-201ENST00000577370 114 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 BNIP3P29-201ENST00000598302 571 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 AC011447.5-201ENST00000616168 564 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 PHKG1P2-201ENST00000457537 863 ntBASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 REXO1L6P-201ENST00000603433 1515 ntBASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 AC134407.2-201ENST00000625089 1978 ntBASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC6Q9UBN7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 TDH-203ENST00000531764 1110 ntBASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms