Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 AL645937.2-201ENST00000396808 931 ntBASIC17.43■□□□□ 0.38
COL20A1Q9P218 MIR1202-201ENST00000408529 83 ntBASIC17.43■□□□□ 0.38
COL20A1Q9P218 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 AC022494.1-201ENST00000466044 728 ntBASIC17.43■□□□□ 0.38
COL20A1Q9P218 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 AC010328.2-201ENST00000597698 1111 ntBASIC17.43■□□□□ 0.38
COL20A1Q9P218 AC006453.4-201ENST00000636949 1252 ntBASIC17.43■□□□□ 0.38
COL20A1Q9P218 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL20A1Q9P218 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COL20A1Q9P218 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AL157414.3-201ENST00000624276 1954 ntBASIC17.42■□□□□ 0.38
COL20A1Q9P218 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AL359258.3-201ENST00000622910 2331 ntBASIC17.42■□□□□ 0.38
COL20A1Q9P218 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AC108725.1-201ENST00000495472 409 ntBASIC17.42■□□□□ 0.38
COL20A1Q9P218 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 REXO1L5P-201ENST00000622260 2098 ntBASIC17.42■□□□□ 0.38
COL20A1Q9P218 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.42■□□□□ 0.38
COL20A1Q9P218 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 AC007950.2-201ENST00000615045 2347 ntBASIC17.42■□□□□ 0.38
COL20A1Q9P218 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL20A1Q9P218 LRRC59-203ENST00000576448 1531 ntBASIC17.42■□□□□ 0.38
COL20A1Q9P218 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 AC020658.6-201ENST00000623564 1870 ntBASIC17.41■□□□□ 0.38
COL20A1Q9P218 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 RN7SL48P-201ENST00000579283 293 ntBASIC17.41■□□□□ 0.38
COL20A1Q9P218 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 MIR6869-201ENST00000619434 62 ntBASIC17.41■□□□□ 0.38
COL20A1Q9P218 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 AC008741.2-201ENST00000612792 3115 ntBASIC17.41■□□□□ 0.38
COL20A1Q9P218 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms