Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.8■□□□□ 0.12
HACD3Q9P035 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC022144.1-201ENST00000602255 1580 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
HACD3Q9P035 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC074338.1-201ENST00000416825 156 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 AC015922.1-201ENST00000421102 1152 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC114501.2-201ENST00000439631 535 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 RPL13P2-201ENST00000440687 659 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC093214.1-201ENST00000511688 1107 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC044860.1-202ENST00000559481 777 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.8■□□□□ 0.12
HACD3Q9P035 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC005498.2-205ENST00000593218 784 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 AL390955.2-201ENST00000603032 514 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.8■□□□□ 0.12
HACD3Q9P035 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC097376.2-205ENST00000610159 5334 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.8■□□□□ 0.12
HACD3Q9P035 AC092127.1-201ENST00000567093 3455 ntBASIC15.8■□□□□ 0.12
HACD3Q9P035 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HACD3Q9P035 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HACD3Q9P035 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HACD3Q9P035 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HACD3Q9P035 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HACD3Q9P035 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HACD3Q9P035 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HACD3Q9P035 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HACD3Q9P035 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HACD3Q9P035 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.79■□□□□ 0.12
HACD3Q9P035 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HACD3Q9P035 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HACD3Q9P035 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.79■□□□□ 0.12
HACD3Q9P035 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.79■□□□□ 0.12
HACD3Q9P035 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.79■□□□□ 0.12
HACD3Q9P035 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.79■□□□□ 0.12
HACD3Q9P035 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.79■□□□□ 0.12
HACD3Q9P035 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.79■□□□□ 0.12
HACD3Q9P035 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HACD3Q9P035 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms