Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 TCAF1P1-201ENST00000414990 2232 ntBASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 MIR1224-201ENST00000408193 85 ntBASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 KRT18P67-201ENST00000432816 1264 ntBASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 AC093724.1-201ENST00000448659 1027 ntBASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 AL365330.1-201ENST00000607459 531 ntBASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 FAM197Y8-203ENST00000450145 560 ntBASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 TP73-AS1-207ENST00000624167 988 ntBASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 AC117500.6-201ENST00000624871 588 ntBASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf4Q9NQ89 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms